Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809708.1_cds_XP_016495901.1_10177
CDS Infomation

[gene=LOC107814909] [db_xref=GeneID:107814909] [protein=oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917] [protein_id=XP_016495901.1] [location=join(26048..26874,27234..27861)] [gbkey=CDS]
Sequence

ATGATTAATGCTTATTTTGCTGGAGGCTTTATGTTTGCCTTCCCAAACATGCTGAGATCA
ACGTTCCCACCTATATTCACGGTCTTTCCGTCTAAGGCCAAACCTCGCAACTATTTAGGC
ACAATTATCACTGCAATATCAAAAACCCCACAAACTGTTCGACAAAATGCCGCAATAGAA
AATATATTCCTGCAACAGCCAACGTCAGCTTACGTTCACCTCCCATTCTGCCGAAAACGC
TGCCACTACTGTGACTTCCCTATCGTCGCTCTCGGCTCAGCTTCACCTCAAGCTGATGAC
GACCCGCGAATTCTTAACTACATTGATTTTCTCTGCAGAGAAATTAAAGCCACCCCAACA
CCTTCCAACCACAAGTCACCTCTTGAAACTGTCTTTTTTGGTGGAGGGACACCTTCACTT
GTGCCACCAAGATTAGTATCTTTAGTCCTGGACAAATTGGACTCTAAATTTGGTGTATGT
TCTGATGCTGAAATTTCAATAGAAATGGACCCTGGTACATTTGATGCTGCAAAGTTGAAC
GATTTGATGAAGTTGGGTGTTAATAGAGTTTCTCTAGGAGTTCAGGCATTCCAGGAGGAA
TTGCTTAAGAGTTGTGGGAGAGCTCATGGCGTACAGGAAATTCATGAGGCTATTGACATT
GTTGGATCATGTGGTGTTGAGAATTGGAGTGTGGACCTTATATCTTCACTTCCTCATCAG
AAGCCACATATGTGGGAACAAAGCTTGAGCCTCACTATTCAAGCAAAGCCTACACATGTC
TCAGTTTACGATTTACAAGTTGAACAAGATACAAAGTTTGGATCTTTGTATACAGCTGGA
GAGTTCCCTCTGCCTTCTGATAATCAATCTGCTGAGTTTTACAAAATGGCCTCTGAAATG
CTAAGAAATGCTGGTTATGAGCACTATGAGATAAGTAGCTACTGCAAAAGTGGTTATCAA
TGCAAGCACAATTATACATACTGGATAAACAAATCTTTTTATGCTTTTGGACTGGGGTCA
GCCAGTTATCTTAATGGGGTAAGGTTTTCAAGGCCAAGGAAGCTGAAAGATTACATGGGT
TATGTGCAAAATTTGGAGAACGGACTAGTGAATTGTTGCCAGGACAGTAAAGTAGACACT
CAAGACATAGCGACGGATGTTGTTATGCTGTCTCTGAGAACTGCTAGAGGGTTGGATTTG
AAATCATTTGGTAAAGCTTTTGGAAGCTCAACTGTTCTCTCCCTTTGCAAGGTCTATAAG
CCTCATATTGAGAGTGGGCATGTTGTCTGTTTGGATGAGCAGAGGAGGAAAATCGAGGCA
GAAGAATTCAGATCTTTGTTATCTGAAGGGGACAAGGTTAATGAGGTATTGGCATATATC
AGGCTTAGTGACCCTGATGGTTTCCTATTATCCAATGAGTTAATATCCCTCGCGTTCAAC
GTGTTAACTCCATAA

Peptide Sequence

PEP ID

XP_016495901.1
PEP Infomation

PREDICTED: oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917 [Nicotiana tabacum]
Sequence

MINAYFAGGFMFAFPNMLRSTFPPIFTVFPSKAKPRNYLGTIITAISKTPQTVRQNAAIE
NIFLQQPTSAYVHLPFCRKRCHYCDFPIVALGSASPQADDDPRILNYIDFLCREIKATPT
PSNHKSPLETVFFGGGTPSLVPPRLVSLVLDKLDSKFGVCSDAEISIEMDPGTFDAAKLN
DLMKLGVNRVSLGVQAFQEELLKSCGRAHGVQEIHEAIDIVGSCGVENWSVDLISSLPHQ
KPHMWEQSLSLTIQAKPTHVSVYDLQVEQDTKFGSLYTAGEFPLPSDNQSAEFYKMASEM
LRNAGYEHYEISSYCKSGYQCKHNYTYWINKSFYAFGLGSASYLNGVRFSRPRKLKDYMG
YVQNLENGLVNCCQDSKVDTQDIATDVVMLSLRTARGLDLKSFGKAFGSSTVLSLCKVYK
PHIESGHVVCLDEQRRKIEAEEFRSLLSEGDKVNEVLAYIRLSDPDGFLLSNELISLAFN
VLTP

Transcript Sequence

Gene sequence data has not been registered.